C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180745 Rps19-ps5-001 ENSMUSG00000097679 10090 + 15:37868086-37868488 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryENSMUST00000180745
Transcript ID Breast Colon Liver Ovary
ENSMUST00000180745 0.200±0.00 0.201±0.00 0.037±0.00 0.618±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 422
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 335
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 287
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 318
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 344
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 438
ENST00000598261 RPS19-007 protein_coding Homo_sapiens 1e-32 143
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000598466 RPS19-004 retained_intron Homo_sapiens 2e-32 143
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 438
ENST00000600467 RPS19-002 protein_coding Homo_sapiens 1e-32 143
ENST00000601492 RPS19-003 protein_coding Homo_sapiens 1e-32 143

Loading