C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8927
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181978 Gm8927-001 ENSMUSG00000098187 10090 + 6:22703436-22704416 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000181978
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000181978 0.089±0.00 0.021±0.00 0.036±0.01 0.127±0.10 0.060±0.00 0.063±0.04 0.065±0.00 0.041±0.03 0.075±0.03 0.029±0.02 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R1 CIL_0003R1_0002 CGP 6:22306520-23052916

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 370
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 966
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 878
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 966
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 966
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 966
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 377
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 785
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 715
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 824
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 472
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 665
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 889
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 767
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 726
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 680
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 521
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 549
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 436
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 929
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 684
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 579
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 878
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 878
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 484
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 638
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 723
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 693
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 769
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 553
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 1e-17 95
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 773
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 785
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 774
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 676
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 966

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