C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453429 RPL7AP7-001 ENSG00000213880 9606 - 6:29803195-29803991 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungPlacentaTestisENST00000453429
Transcript ID Breast Lung Placenta Testis
ENST00000453429 0.022±0.00 0.021±0.00 0.046±0.01 0.122±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0003 CGP 6:29722775-29831125

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 797
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 780
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 774
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000071565 Gm4978-201 protein_coding Mus_musculus 0 717
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000118638 Gm13039-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000185999 RP23-16N14.6-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000184700 Gm7863-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000119952 Gm15836-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 662
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 641
ENSMUST00000119629 Gm11979-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000117240 Gm11989-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000184654 Gm14214-002 protein_coding Mus_musculus 0 564
ENSMUST00000116081 Gm14853-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000188004 RP23-78M21.1-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000119908 Gm9005-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 363
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000129673 Rpl7a-005 processed_transcript Mus_musculus 0 274
ENSMUST00000149339 Rpl7a-006 processed_transcript Mus_musculus 6.02558e-44 182

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