C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188361 RP23-299M19.2-001 ENSMUSG00000101736 10090 - 1:88722366-88722824 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainPlacentaTestisENSMUST00000188361
Transcript ID Bladder Brain Placenta Testis
ENSMUST00000188361 0.027±0.00 0.038±0.01 0.115±0.05 0.176±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RR CIL_0004RR_0003 CGP 1:88673125-89155068

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 255
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 207
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 180
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 7e-34 148
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 255
ENST00000473590 CTC-232H10.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 255
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 255
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 1e-25 121
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 4e-26 122
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 193
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 204
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 255
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 250
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 255
ENST00000495837 RPL29P14-001 processed_pseudogene Homo_sapiens 0.000000000006 75

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