C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 3e
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312988 TUBA3E-001 ENSG00000152086 9606 - 2:130191743-130198461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverOvaryPlacentaTestisENST00000312988
Transcript ID Adipose Adrenal Brain Breast Heart Liver Ovary Placenta Testis
ENST00000312988 0.145±0.00 0.047±0.00 0.038±0.00 0.052±0.00 5.652±4.86 0.014±0.00 0.044±0.02 1.966±0.81 66.093±34.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0008150 ND biological_process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087445 Tuba3b-001 protein_coding Mus_musculus 0 1779
ENSMUST00000088246 Tuba3a-201 protein_coding Mus_musculus 0 1759
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 1400
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 1386
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 1378
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 1363
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 1327
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 1221
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 1210
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 1195
ENSDART00000062671 tuba8l-201 protein_coding Danio_rerio 0 1110
ENSDART00000026292 tuba7l-201 protein_coding Danio_rerio 0 1079
ENSMUST00000032233 Tuba8-001 protein_coding Mus_musculus 0 1040
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 983
ENSDART00000115157 tuba4l-201 protein_coding Danio_rerio 0 787
ENSDART00000113297 tuba1b-201 protein_coding Danio_rerio 0 300
ENSMUST00000140969 Tuba1b-002 retained_intron Mus_musculus 0 250

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