C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357495 HNRNPA1L2-001 ENSG00000139675 9606 + 13:52640786-52643796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357495
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357495 0.477±0.00 1.983±0.00 1.062±0.00 0.476±0.07 0.480±0.00 0.218±0.00 0.829±0.00 0.211±0.06 0.359±0.02 0.150±0.00 1.504±0.36 0.537±0.23 1.469±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000380 IEA alternative mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0008380 IEA RNA splicing
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1832
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1339
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1286
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1258
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1232
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1218
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 1075
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1066
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 1035
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 996
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 885
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000121371 Gm13973-001 processed_pseudogene Mus_musculus 0 207

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