C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 67
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402896 RPL21P67-001 ENSG00000219776 9606 + 6:131469059-131469536 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungTestisENST00000402896
Transcript ID Adrenal Breast Colon Kidney Lung Testis
ENST00000402896 0.110±0.00 0.108±0.00 0.025±0.00 0.027±0.00 0.483±0.46 0.047±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 405
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 405
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 405
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 399
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 383
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 370
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 370
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 359
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000117320 Gm15578-001 unprocessed_pseudogene Mus_musculus 0 320
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 274
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 4e-34 148
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 1e-18 97
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 0.000000000000003 86

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