C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412542 RP6-105D16.1-001 ENSG00000214016 9606 + X:44741087-44741964 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000412542
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000412542 0.038±0.00 0.283±0.00 0.022±0.00 0.085±0.00 0.173±0.00 0.073±0.00 0.226±0.00 0.072±0.00 0.077±0.00 0.068±0.00 0.157±0.10 0.313±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q9 CIL_0005Q9_0001 CGP X:44523639-44844888

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 987
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 976
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 237

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