C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7429
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118664 Gm7429-001 ENSMUSG00000082260 10090 - X:114980970-114981317 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverOvaryPlacentaENSMUST00000118664
Transcript ID Adrenal Bladder Brain Breast Heart Liver Ovary Placenta
ENSMUST00000118664 0.532±0.00 0.063±0.02 0.083±0.00 0.545±0.26 0.186±0.00 0.040±0.01 0.470±0.00 0.109±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052082 rpl30-001 protein_coding Danio_rerio 0 283
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 510
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 243
ENST00000414021 RPL30P2-001 processed_pseudogene Homo_sapiens 0 259
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 217
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 418
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 324
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 0 196
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 363
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 427
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 403
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 243
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 248
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 211
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 510
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 272
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 503
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 270

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