C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142643 Rpl30-005 ENSMUSG00000058600 10090 - 15:34440505-34442908 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryENSMUST00000142643
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary
ENSMUST00000142643 107.577±0.00 37.389±5.93 38.406±9.37 19.712±0.00 27.837±3.22 55.441±23.41 41.168±7.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KP CIL_0001KP_0002 CGP 15:34440505-34473892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 499
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 217
ENST00000414021 RPL30P2-001 processed_pseudogene Homo_sapiens 0 272
ENST00000418873 RPL30P13-001 processed_pseudogene Homo_sapiens 0 364
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 233
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 403
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 335
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 0 202
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 377
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 422
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 442
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 217
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 222
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 239
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 499
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 287
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 488
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 283

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