C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6570
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071536 Gm6570-201 ENSMUSG00000060209 10090 - 3:87679651-87679998 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000071536
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000071536 0.202±0.00 0.105±0.03 0.344±0.02 0.363±0.13 0.599±0.21 0.359±0.00 0.199±0.03 0.107±0.08 0.319±0.00 1.055±0.45 0.236±0.00 0.264±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 488
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 220
ENST00000414021 RPL30P2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000418873 RPL30P13-001 processed_pseudogene Homo_sapiens 0 357
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 217
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 396
ENST00000441288 RP11-759F5.1-001 processed_pseudogene Homo_sapiens 0.00000003 62
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 307
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 0 196
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 350
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 433
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 394
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 220
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 226
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 202
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 488
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 272
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 481
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 270

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