C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417985 ACTBP1-001 ENSG00000229145 9606 - X:46288016-46289128 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000417985
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000417985 0.147±0.00 0.142±0.00 0.040±0.00 0.249±0.00 0.312±0.00 0.016±0.00 0.018±0.00 0.046±0.00 0.286±0.00 0.029±0.00 0.020±0.00 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 835
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 835
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 824
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 817
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 817
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 782
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 689
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 667
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 610
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 597
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 584
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 562
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 542
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 527
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 368
ENSMUST00000149888 Gm14747-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 0 235

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