C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119767 Rpl30-ps1-001 ENSMUSG00000057696 10090 + 6:38376807-38377154 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverOvaryPlacentaENSMUST00000119767
Transcript ID Adipose Bladder Brain Breast Heart Liver Ovary Placenta
ENSMUST00000119767 0.207±0.00 0.209±0.03 0.727±0.00 0.517±0.00 0.186±0.00 0.969±1.31 0.781±0.37 0.235±0.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052082 rpl30-001 protein_coding Danio_rerio 0 294
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 516
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 243
ENST00000418873 RPL30P13-001 processed_pseudogene Homo_sapiens 0 350
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 222
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 418
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 329
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 0 202
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 374
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 433
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 409
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 243
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 246
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 209
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 516
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 278
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 508
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 276

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