C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135417 Rpl30-003 ENSMUSG00000058600 10090 - 15:34440505-34443160 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KP CIL_0001KP_0002 CGP 15:34440505-34473892

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052082 rpl30-001 protein_coding Danio_rerio 3e-31 141
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 302
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 298
ENST00000418873 RPL30P13-001 processed_pseudogene Homo_sapiens 9e-39 163
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0.00000004 62
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 211
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 4e-32 141
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 202
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 220
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 298
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 307
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 226
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 315
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 248
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 303
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 215

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