C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 59
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430583 HNRNPA1P59-001 ENSG00000230280 9606 + 1:202911812-202912729 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMuscleOvaryPlacentaTestisENST00000430583
Transcript ID Adipose Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000430583 0.043±0.00 0.015±0.00 0.035±0.00 0.068±0.00 0.040±0.00 0.027±0.00 0.107±0.06 0.048±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TX CIL_0000TX_0002 CGP 1:202891100-202958572

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 734
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 734
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 734
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 580
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 244

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