C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431241 RP11-556K13.1-001 ENSG00000183298 9606 - 1:101786340-101787219 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431241
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431241 0.092±0.00 0.098±0.00 0.210±0.15 0.081±0.02 0.092±0.04 0.018±0.00 0.060±0.00 0.070±0.00 0.056±0.00 0.033±0.00 0.075±0.03 0.117±0.06 0.114±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 1062
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 1051
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 1029
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 942
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 902
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 617
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 608
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 267

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