C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439114 AC114755.4-001 ENSG00000233939 9606 + 2:106304755-106305197 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000439114
Transcript ID Testis
ENST00000439114 0.123±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077389 Gm7536-201 protein_coding Mus_musculus 0 287
ENSMUST00000053298 Rpl27a-005 retained_intron Mus_musculus 0 287
ENSMUST00000143107 Rpl27a-001 protein_coding Mus_musculus 0 287
ENSMUST00000170338 RP23-323H18.3-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000117531 Gm14044-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000080866 Gm5453-201 processed_pseudogene Mus_musculus 0 254
ENSMUST00000075382 Rpl27a-ps1-201 processed_pseudogene Mus_musculus 0 248
ENSMUST00000084199 Gm6378-201 processed_pseudogene Mus_musculus 0 246
ENSMUST00000122320 Gm14439-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121260 Gm14407-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000189120 RP24-158I9.1-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000132877 Rpl27a-002 retained_intron Mus_musculus 6e-37 158
ENSMUST00000156921 Rpl27a-003 nonsense_mediated_decay Mus_musculus 7e-36 154

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