C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5453
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080866 Gm5453-201 ENSMUSG00000062461 10090 + 13:98904224-98904670 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000080866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000080866 0.918±0.25 0.515±0.47 0.482±0.25 0.130±0.00 0.460±0.14 1.314±0.00 0.218±0.10 0.431±0.07 0.319±0.22 0.249±0.00 1.192±0.45 0.824±0.57 0.201±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 568
ENST00000439114 AC114755.4-001 processed_pseudogene Homo_sapiens 0 254
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 451
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 2e-22 110
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 8e-39 163
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 191
ENST00000529227 RPL27A-002 retained_intron Homo_sapiens 1e-24 117
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 564
ENST00000530585 RPL27A-003 retained_intron Homo_sapiens 0 193
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 392
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 195
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 2e-22 110
ENST00000578806 RP11-692N5.2-001 processed_pseudogene Homo_sapiens 0 259

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