C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474589 RP11-713P14.1-001 ENSG00000240881 9606 + 11:23520322-23521202 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NT CIL_0005NT_0001 CGP 11:22846931-25082631

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 617
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 617
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 617
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 612
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 608
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 595
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 595
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 584
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 569
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 555
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 542
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000169235 Gm7502-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 470
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 470
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 470
ENSMUST00000129580 Rps2-005 retained_intron Mus_musculus 0 444
ENSMUST00000117930 Gm13094-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 7.00649e-44 182

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