C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12091
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146791 Gm12091-001 ENSMUSG00000085893 10090 - 11:29601784-29602613 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000146791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000146791 0.229±0.12 0.337±0.19 4.665±4.58 12.555±2.80 0.352±0.18 0.225±0.14 0.150±0.04 0.120±0.05 6.032±13.25 0.073±0.03 0.147±0.08 0.236±0.13 0.119±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 641
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 815
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 782
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 809
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 712
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 634
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 717
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 749
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 3e-25 117
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 708
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 444
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 798
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 569
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 625
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 664
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 549
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 771
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 806
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 656
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000494599 RPS2P24-001 processed_pseudogene Homo_sapiens 0 658
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 357
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 9e-38 161
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 353
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 353
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 649
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 8e-38 161
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 669
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 353
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 560
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 560
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 617
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 678

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