C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10420
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121713 Gm10420-001 ENSMUSG00000072789 10090 + 6:122696001-122696882 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121713 0.151±0.11 0.127±0.06 0.098±0.02 1.176±1.12 0.182±0.06 0.107±0.04 0.099±0.04 0.108±0.02 1.154±3.02 0.134±0.03 0.091±0.01 0.231±0.20 0.051±0.02 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0002 VISTA 6:122092605-122696323

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 758
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 767
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 730
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 741
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 749
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 632
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 486
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 599
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 765
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 573
ENST00000475555 RP11-364L4.1-001 processed_pseudogene Homo_sapiens 2e-24 117
ENST00000476944 RPS2P4-001 processed_pseudogene Homo_sapiens 0 885
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 612
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 715
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 599
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 739
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 747

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