C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6433
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118634 Gm6433-001 ENSMUSG00000083382 10090 - 5:141267581-141268455 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118634 1.041±0.37 0.245±0.08 0.182±0.02 0.053±0.00 0.581±0.31 0.238±0.13 0.212±0.08 0.277±0.21 0.384±0.80 0.244±0.10 0.119±0.08 1.109±0.81 0.155±0.05 0.207±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M9 CIL_0002M9_0002 CGP 5:140872999-142215586
CIL_0002MA CIL_0002MA_0002 CGP 5:141241490-142462014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 652
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 905
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 874
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 894
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 773
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 712
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 671
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 713
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 558
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 686
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 782
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 9e-35 148
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 774
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 800
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 582
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 710
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 551
ENST00000475555 RP11-364L4.1-001 processed_pseudogene Homo_sapiens 3e-22 110
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 558
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 664
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 811
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 894
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 632
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 686
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 399
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 198
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 396
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 396
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 628
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 198
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 649
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 396
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 551
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 549
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 586
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 603
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 689

Loading