C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11687
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118911 Gm11687-001 ENSMUSG00000082480 10090 - 2:144142488-144143373 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118911
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118911 0.652±0.55 0.277±0.09 0.189±0.07 0.765±1.00 0.753±0.56 0.787±0.27 0.222±0.04 0.240±0.05 1.552±2.94 0.461±0.10 0.197±0.08 0.430±0.30 0.440±0.25 0.293±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692
CIL_0002MX CIL_0002MX_0002 CGP 2:144033059-144270906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 715
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 715
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 725
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 994
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 950
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 961
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 817
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 728
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 630
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 776
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 865
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 2e-36 154
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 817
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 676
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 881
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 638
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 706
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 754
ENST00000469997 RPS2P45-002 processed_transcript Homo_sapiens 0 438
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000475555 RP11-364L4.1-001 processed_pseudogene Homo_sapiens 2e-19 100
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 617
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 887
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 963
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 732
ENST00000490535 RPS2P45-001 transcribed_processed_pseudogene Homo_sapiens 0 532
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000492327 RPS2P39-001 processed_pseudogene Homo_sapiens 0 368
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 427
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 220
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 424
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 424
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 728
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 220
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 756
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 756
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 424
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 636
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 634
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 658
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 651
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 776

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