C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11599
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118720 Gm11599-001 ENSMUSG00000084333 10090 + 1:62660839-62661716 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118720 0.199±0.08 0.182±0.03 2.267±0.22 1.444±0.12 0.230±0.06 0.322±0.13 0.220±0.08 0.402±0.11 0.872±1.62 0.128±0.09 0.082±0.01 0.209±0.17 0.123±0.04 0.080±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R1 CIL_0001R1_0002 CGP 1:61638824-62818695

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 697
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 937
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 721
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 894
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 904
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 780
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 763
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 725
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 734
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 752
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 856
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 3e-35 150
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 798
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 658
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 850
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 673
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 736
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 586
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 719
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 865
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 920
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 721
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 590
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 713
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 396
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 195
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 392
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 392
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 704
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 195
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 725
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 392
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 621
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 619
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 643
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 610
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 730

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