C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475365 EEF1A1P10-001 ENSG00000243746 9606 - 7:144647186-144648575 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000475365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000475365 0.734±0.00 0.770±0.00 0.041±0.00 0.276±0.00 0.454±0.32 0.486±0.10 0.127±0.08 0.270±0.23 0.136±0.02 0.275±0.18 0.429±0.00 0.121±0.08 0.069±0.05 0.279±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XS CIL_0004XS_0001 CGP 7:144397240-144836395
CIL_0004XR CIL_0004XR_0001 CGP 7:144451941-148420998

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1652
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1546
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1535
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1471
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1371
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1297
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1277
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 983
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 953
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 920
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 802
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 699
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 676
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 0 652
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 507
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 484
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 403

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