C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9 pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491923 RPL9P16-001 ENSG00000214676 9606 + 4:168755816-168756382 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartLungOvaryPlacentaTestisENST00000491923
Transcript ID Adrenal Bladder Breast Heart Lung Ovary Placenta Testis
ENST00000491923 0.049±0.00 0.893±0.00 0.265±0.24 0.541±0.06 0.072±0.00 0.144±0.06 0.267±0.00 0.323±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119147 Rpl9-ps3-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000075549 Rpl9-ps4-201 processed_pseudogene Mus_musculus 0 435
ENSMUST00000080545 Gm5451-201 processed_pseudogene Mus_musculus 0 435
ENSMUST00000120094 Rpl9-007 protein_coding Mus_musculus 0 435
ENSMUST00000057885 Rpl9-001 protein_coding Mus_musculus 0 435
ENSMUST00000140507 Rpl9-ps7-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000078034 Rpl9-ps6-201 protein_coding Mus_musculus 0 429
ENSMUST00000120090 Gm14231-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000118543 Rpl9-006 protein_coding Mus_musculus 0 344
ENSMUST00000117730 Gm7206-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000117749 Gm11462-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000147966 Rpl9-009 retained_intron Mus_musculus 0 200
ENSMUST00000120358 Gm15037-001 processed_pseudogene Mus_musculus 7e-32 141
ENSMUST00000140879 Rpl9-010 retained_intron Mus_musculus 6e-23 111
ENSMUST00000147660 Rpl9-004 retained_intron Mus_musculus 6e-23 111
ENSMUST00000128074 Rpl9-002 retained_intron Mus_musculus 6e-23 111

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