C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147966 Rpl9-009 ENSMUSG00000047215 10090 - 5:65388407-65389373 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TV CIL_0002TV_0003 CGP 5:65388364-65410693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 252
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 252
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 252
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 4e-30 135
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 2e-28 130
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 252
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 246
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 224
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 252
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 1e-39 167
ENST00000491923 RPL9P16-001 processed_pseudogene Homo_sapiens 0 200
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 2e-38 163
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 215
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 252
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0 248
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 252
ENST00000511084 CTB-85P21.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 0 254
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 252

Loading