C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495231 RP11-434O22.1-001 ENSG00000243824 9606 - 14:34740336-34740833 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleENST00000495231
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle
ENST00000495231 0.034±0.00 0.036±0.00 0.075±0.00 0.034±0.00 0.037±0.00 0.077±0.00 0.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RD CIL_0005RD_0002 CGP 14:34706769-34875647

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 566
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 566
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 560
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 544
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 516
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 1e-34 150
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 2e-32 143

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