C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10275
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092620 Gm10275-002 ENSMUSG00000069682 10090 - 10:29698746-29699380 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092620
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092620 49.196±22.07 2.954±0.28 37.009±8.36 29.582±12.95 53.281±26.81 27.166±5.81 8.812±1.81 12.257±7.72 78.794±29.38 22.571±4.68 2.172±0.89 43.898±32.13 1.570±1.38 13.185±0.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141676 rpl12-002 processed_transcript Danio_rerio 0.0000000004 69
ENSDART00000135459 rpl12-003 retained_intron Danio_rerio 0.0000000004 69
ENSDART00000008807 rpl12-001 protein_coding Danio_rerio 0.0000000004 69
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 520
ENST00000361436 RPL12-001 protein_coding Homo_sapiens 0 787
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 1e-37 158
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 547
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 601
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 342
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 0 207
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 516
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 532
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 630
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000460355 NBEAL1-003 retained_intron Homo_sapiens 0 782
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 484
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 569
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 680
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 532
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 484
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 492
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 479
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 566
ENST00000497322 RPL12-002 processed_transcript Homo_sapiens 0 198
ENST00000497825 RPL12-003 processed_transcript Homo_sapiens 0 198
ENST00000536368 RPL12-201 protein_coding Homo_sapiens 0 237
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 719
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 4e-32 139

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