C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10275
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168697 Gm10275-001 ENSMUSG00000069682 10090 - 10:29698796-29699290 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168697
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168697 9.558±2.17 9.350±0.00 4.283±0.00 9.804±0.00 18.385±6.46 4.157±0.63 18.527±1.10 20.361±3.28 9.698±0.53 1.013±0.68 14.045±5.01 6.642±3.47 3.153±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 514
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 6e-36 152
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 593
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 342
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 0 204
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 516
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 527
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 625
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 571
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 484
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 564
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 551
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 532
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 484
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 486
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 479
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 564
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 4e-32 139

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