C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150739 Rps27a-005 ENSMUSG00000020460 10090 - 11:29545899-29547882 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 0 200
ENST00000302182 UBB-001 protein_coding Homo_sapiens 4e-23 113
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 6e-27 124
ENST00000392399 UBBP1-001 processed_pseudogene Homo_sapiens 3e-20 102
ENST00000395837 UBB-002 protein_coding Homo_sapiens 3e-23 113
ENST00000395839 UBB-003 protein_coding Homo_sapiens 3e-23 113
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 440
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000422792 AC079807.3-001 processed_pseudogene Homo_sapiens 6e-27 124
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 8e-26 121
ENST00000434254 AC008072.1-001 processed_pseudogene Homo_sapiens 1e-20 104
ENST00000443181 MIR4426-001 processed_pseudogene Homo_sapiens 0 472
ENST00000447672 RP11-28P17.3-001 processed_pseudogene Homo_sapiens 0 326
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 2e-40 169
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 350
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 2e-32 143
ENST00000471772 RPS27A-009 retained_intron Homo_sapiens 0 202
ENST00000475545 RPS27AP1-001 processed_pseudogene Homo_sapiens 0 399
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 0 189
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 4e-34 148
ENST00000494756 RPS27A-012 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 2e-40 171
ENST00000498403 RP11-1070A24.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000515536 RP11-166J22.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000535788 UBB-005 protein_coding Homo_sapiens 2e-23 113
ENST00000577640 UBB-008 protein_coding Homo_sapiens 2e-23 113
ENST00000577958 UBB-006 protein_coding Homo_sapiens 1e-23 113
ENST00000578706 UBB-007 protein_coding Homo_sapiens 1e-23 113
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 2e-38 163
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 307
ENST00000611893 RPS27A-201 protein_coding Homo_sapiens 0 200
ENST00000614404 UBB-201 protein_coding Homo_sapiens 3e-23 113

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