C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13815
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119963 Gm13815-001 ENSMUSG00000080860 10090 + 2:92561269-92561680 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENSMUST00000119963
Transcript ID Muscle Testis
ENSMUST00000119963 0.102±0.00 0.941±0.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 0 477
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000339647 UBC-001 protein_coding Homo_sapiens 4e-26 124
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 0 477
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 0 477
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000443181 MIR4426-001 processed_pseudogene Homo_sapiens 0 455
ENST00000447672 RP11-28P17.3-001 processed_pseudogene Homo_sapiens 0 339
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 0 307
ENST00000452665 RP11-423E7.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 392
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 2e-18 97
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 340
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 0 318
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 486
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 0 309
ENST00000498403 RP11-1070A24.1-001 processed_pseudogene Homo_sapiens 0 217
ENST00000536769 UBC-007 protein_coding Homo_sapiens 5e-26 124
ENST00000541272 UBC-016 protein_coding Homo_sapiens 8e-27 124
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 486
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 309

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