C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521313 HNRNPA1P36-001 ENSG00000231942 9606 + 8:81807772-81808726 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000521313
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000521313 0.181±0.00 0.161±0.00 0.079±0.03 0.137±0.06 0.087±0.01 0.080±0.00 0.176±0.00 0.027±0.00 0.014±0.00 0.103±0.00 0.073±0.00 0.046±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071W CIL_00071W_0001 CGP 8:81732434-81842866

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1155
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1155
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1120
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1072
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1064
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1038
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 918
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 872
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 867
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 839
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 440

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