C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560090 KRT8P23-001 ENSG00000259565 9606 - 15:76979245-76980451 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLungOvaryTestisENST00000560090
Transcript ID Brain Colon Kidney Lung Ovary Testis
ENST00000560090 0.036±0.02 0.072±0.00 0.020±0.00 0.020±0.00 0.031±0.01 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0001 CGP 15:76931619-77037332

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1070
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 433
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 385
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 320
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 309
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 292
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 243
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 1e-37 161
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 6e-31 139
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 0.00000000000003 84
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000005 60

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