C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567299 CTC-543D15.1-001 ENSG00000260112 9606 + 19:9518150-9519341 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000567299
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000567299 0.183±0.00 0.308±0.00 0.129±0.00 0.138±0.00 0.093±0.00 0.173±0.00 0.050±0.00 0.320±0.00 0.060±0.00 0.041±0.00 0.049±0.00 0.043±0.00 0.287±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 405
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 405
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 355
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 350
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 350
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 346
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 272
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 263
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 261
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 261
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 198
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 198
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 198
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 198
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000008 69

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