C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17087
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184255 Gm17087-001 ENSMUSG00000099104 10090 - 17:8565852-8566950 translated_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLungOvaryPlacentaTestisENSMUST00000184255
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Lung Ovary Placenta Testis
ENSMUST00000184255 0.091±0.00 0.129±0.04 0.012±0.00 0.022±0.00 0.029±0.00 0.170±0.00 0.064±0.03 0.342±0.20 0.040±0.00 0.040±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 815
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 815
ENSDART00000080664 protein_coding Danio_rerio 0 689
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 660
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 647
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 614
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 593
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 577
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 544
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 508
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 501
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 470
ENST00000331789 ACTB-001 protein_coding Homo_sapiens 0 972
ENST00000331925 ACTG1-001 protein_coding Homo_sapiens 0 857
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 684
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 833
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 845
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 313
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 564
ENST00000397487 POTEKP-001 unprocessed_pseudogene Homo_sapiens 0 861
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 822
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 684
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 525
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 845
ENST00000415776 ACTG1P2-001 processed_pseudogene Homo_sapiens 0 645
ENST00000417657 LA16c-3G11.7-001 processed_pseudogene Homo_sapiens 0 833
ENST00000418987 RP11-394D2.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000420887 RP11-259P15.3-001 processed_pseudogene Homo_sapiens 0 501
ENST00000423183 ACTG1P12-001 processed_pseudogene Homo_sapiens 0 647
ENST00000423293 RP11-12M9.4-001 processed_pseudogene Homo_sapiens 0 364
ENST00000423783 POTENP-001 processed_pseudogene Homo_sapiens 0 484
ENST00000425411 ACTG1P11-001 processed_pseudogene Homo_sapiens 0 645
ENST00000425660 ACTB-002 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000432588 ACTB-008 protein_coding Homo_sapiens 0 464
ENST00000436287 ACTBP11-001 processed_pseudogene Homo_sapiens 0 739
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 802
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 833
ENST00000462494 ACTB-003 retained_intron Homo_sapiens 0 621
ENST00000473257 ACTB-011 processed_transcript Homo_sapiens 0 422
ENST00000477812 ACTB-007 retained_intron Homo_sapiens 0 464
ENST00000484841 ACTB-005 retained_intron Homo_sapiens 0 802
ENST00000493945 ACTB-004 retained_intron Homo_sapiens 0 730
ENST00000520036 ACTBP6-001 processed_pseudogene Homo_sapiens 0 291
ENST00000567299 CTC-543D15.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 584
ENST00000571691 ACTG1-017 protein_coding Homo_sapiens 0 540
ENST00000572105 ACTG1-015 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000573283 ACTG1-003 protein_coding Homo_sapiens 0 857
ENST00000574671 ACTG1-008 retained_intron Homo_sapiens 0 555
ENST00000575087 ACTG1-002 protein_coding Homo_sapiens 0 857
ENST00000575659 ACTG1-010 protein_coding Homo_sapiens 0 505
ENST00000575842 ACTG1-012 protein_coding Homo_sapiens 0 857
ENST00000575994 ACTG1-011 protein_coding Homo_sapiens 0 505
ENST00000576209 ACTG1-009 retained_intron Homo_sapiens 0 798
ENST00000576214 ACTG1-016 retained_intron Homo_sapiens 0 383
ENST00000576544 ACTG1-006 nonsense_mediated_decay Homo_sapiens 0 857
ENST00000576917 ACTG1-004 retained_intron Homo_sapiens 0 662
ENST00000587663 ACTBP9-001 processed_pseudogene Homo_sapiens 0 693
ENST00000615544 ACTG1-201 protein_coding Homo_sapiens 0 857

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