C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592443 KRT8P5-001 ENSG00000267573 9606 - 18:44320800-44322257 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000592443
Transcript ID Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000592443 0.100±0.00 0.049±0.00 0.013±0.00 0.032±0.00 0.013±0.00 0.235±0.00 0.042±0.00 0.077±0.00 0.270±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1053
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 375
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 292
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 0 222
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0 222
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 2.94273e-44 183
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 3.9937e-43 180
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 7e-36 156
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 3e-30 137
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 3e-30 137
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 4e-23 113
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 7e-21 106
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 7e-21 106
ENSDART00000121861 prph-201 protein_coding Danio_rerio 2e-17 95
ENSDART00000154314 prph-001 protein_coding Danio_rerio 2e-17 95
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000006 60

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