C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin, beta 4A class IVa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600216 TUBB4A-015 ENSG00000104833 9606 - 19:6495808-6502309 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000600216
Transcript ID Breast Muscle
ENST00000600216 0.150±0.00 2.794±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061U CIL_00061U_0001 CGP 19:6467207-6502848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule
GO:0007017 IEA microtubule-based process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071135 Tubb4a-201 protein_coding Mus_musculus 0 425
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 409
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 405
ENSDART00000143702 zgc:123194-001 protein_coding Danio_rerio 0 381
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 379
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 379
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 370
ENSDART00000131187 tubb4b-201 protein_coding Danio_rerio 0 359
ENSDART00000066859 tubb4b-001 protein_coding Danio_rerio 0 359
ENSDART00000041279 tubb4b-001 protein_coding Danio_rerio 0 326

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