C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:123194
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000143702 zgc:123194-001 ENSDARG00000035423 7955 + 8:54975726-54978405 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000143702
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000143702 96.901±105.34 18.710±4.35 23.696±8.63 3.389±0.00 19.733±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 1057
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1230
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1240
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1147
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 1290
ENSMUST00000134978 Tubb5-003 protein_coding Mus_musculus 0 230
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 582
ENSMUST00000187481 RP23-8J15.8-001 processed_pseudogene Mus_musculus 0 1083
ENST00000248151 TUBBP1-001 transcribed_processed_pseudogene Homo_sapiens 0 1122
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1304
ENST00000264071 TUBB4A-001 protein_coding Homo_sapiens 0 1319
ENST00000308911 RP11-683L23.1-201 protein_coding Homo_sapiens 0 955
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 1153
ENST00000327892 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000330914 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1304
ENST00000340384 TUBB4B-001 protein_coding Homo_sapiens 0 1267
ENST00000383564 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000396384 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000396389 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000400530 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000400531 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000400534 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000412136 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000413547 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000415481 TUBB8P11-001 unprocessed_pseudogene Homo_sapiens 0 791
ENST00000416519 TUBBP6-001 processed_pseudogene Homo_sapiens 0 881
ENST00000419551 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000419792 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000420400 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000420618 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000421473 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000422650 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000422674 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000424734 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000425102 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000425136 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000426754 TUBB-003 protein_coding Homo_sapiens 0 1179
ENST00000427480 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000432462 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000435546 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000436335 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000436628 TUBB-001 protein_coding Homo_sapiens 0 1227
ENST00000437490 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000444441 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000446385 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000447235 TUBB8P1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000453350 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000454403 TUBBP2-001 processed_pseudogene Homo_sapiens 0 388
ENST00000454454 TUBB-002 protein_coding Homo_sapiens 0 1186
ENST00000454620 TUBB-004 protein_coding Homo_sapiens 0 1188
ENST00000458717 TUBB8P8-001 unprocessed_pseudogene Homo_sapiens 0 804
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1273
ENST00000518096 TUBBP1-002 processed_transcript Homo_sapiens 0 1122
ENST00000540257 TUBB4A-201 protein_coding Homo_sapiens 0 1319
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 1112
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 1096
ENST00000555810 TUBB3-004 protein_coding Homo_sapiens 0 540
ENST00000556536 TUBB3-012 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 1112
ENST00000557490 TUBB3-014 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000561967 TUBB8-007 protein_coding Homo_sapiens 0 887
ENST00000564130 TUBB8-005 protein_coding Homo_sapiens 0 822
ENST00000568584 TUBB8-001 protein_coding Homo_sapiens 0 972
ENST00000568866 TUBB8-008 protein_coding Homo_sapiens 0 822
ENST00000573909 RP11-683L23.1-002 protein_coding Homo_sapiens 0 817
ENST00000594075 TUBB4A-009 protein_coding Homo_sapiens 0 339
ENST00000594276 TUBB4A-010 protein_coding Homo_sapiens 0 322
ENST00000595324 TUBB4A-011 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000600216 TUBB4A-015 protein_coding Homo_sapiens 0 381
ENST00000601152 TUBB4A-007 protein_coding Homo_sapiens 0 383
ENST00000604929 TUBB4B-002 retained_intron Homo_sapiens 0 1096

Loading