C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 4B class IVb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000131187 tubb4b-201 ENSDARG00000091444 7955 - 3:50839185-50845935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000131187
Transcript ID Brain Liver Muscle
ENSDART00000131187 6.319±2.38 0.022±0.00 0.499±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1327
ENSMUST00000016399 Tubb1-001 protein_coding Mus_musculus 0 634
ENSMUST00000043584 Tubb4b-001 protein_coding Mus_musculus 0 1162
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1277
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1168
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 1303
ENSMUST00000117711 Gm11892-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000160140 Gm16165-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 649
ENSMUST00000179460 Tubb4b-ps1-201 protein_coding Mus_musculus 0 1140
ENSMUST00000187481 RP23-8J15.8-001 processed_pseudogene Mus_musculus 0 1007
ENST00000217133 TUBB1-001 protein_coding Homo_sapiens 0 606
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1280
ENST00000264071 TUBB4A-001 protein_coding Homo_sapiens 0 1288
ENST00000308911 RP11-683L23.1-201 protein_coding Homo_sapiens 0 889
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 1179
ENST00000317702 TUBB6-001 protein_coding Homo_sapiens 0 1090
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1253
ENST00000340384 TUBB4B-001 protein_coding Homo_sapiens 0 1171
ENST00000405796 TUBB3P1-001 processed_pseudogene Homo_sapiens 0 754
ENST00000415481 TUBB8P11-001 unprocessed_pseudogene Homo_sapiens 0 739
ENST00000417736 TUBB6-002 retained_intron Homo_sapiens 0 1048
ENST00000436895 TUBB8P6-001 unprocessed_pseudogene Homo_sapiens 0 547
ENST00000447235 TUBB8P1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000458717 TUBB8P8-001 unprocessed_pseudogene Homo_sapiens 0 761
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1206
ENST00000540257 TUBB4A-201 protein_coding Homo_sapiens 0 1288
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 1116
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 1096
ENST00000555810 TUBB3-004 protein_coding Homo_sapiens 0 606
ENST00000556536 TUBB3-012 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 1116
ENST00000557490 TUBB3-014 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000561967 TUBB8-007 protein_coding Homo_sapiens 0 832
ENST00000564130 TUBB8-005 protein_coding Homo_sapiens 0 791
ENST00000568584 TUBB8-001 protein_coding Homo_sapiens 0 917
ENST00000568866 TUBB8-008 protein_coding Homo_sapiens 0 791
ENST00000573909 RP11-683L23.1-002 protein_coding Homo_sapiens 0 785
ENST00000590103 TUBB6-008 protein_coding Homo_sapiens 0 837
ENST00000591208 TUBB6-005 protein_coding Homo_sapiens 0 915
ENST00000594075 TUBB4A-009 protein_coding Homo_sapiens 0 327
ENST00000594276 TUBB4A-010 protein_coding Homo_sapiens 0 333
ENST00000595324 TUBB4A-011 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000600216 TUBB4A-015 protein_coding Homo_sapiens 0 359
ENST00000601152 TUBB4A-007 protein_coding Homo_sapiens 0 344
ENST00000604929 TUBB4B-002 retained_intron Homo_sapiens 0 998

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