C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21, pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081668 Rpl21-ps12-201 ENSMUSG00000057370 10090 - 6:90844978-90845460 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000081668
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000081668 0.113±0.06 0.153±0.09 0.064±0.05 0.156±0.03 0.370±0.19 0.165±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051B CIL_00051B_0002 CGP 6:90659598-91116829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 231
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 549
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 549
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 549
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 549
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 444
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 544
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 453
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 505
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 379
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 494
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.00000004 62
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 261
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 407
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 326
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 499
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 255
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 510
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 494
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 231
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 460
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 1e-18 97
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 305
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 516
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 457
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 231
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 499
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 453
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 1e-18 97
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 529
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 298
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 531
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 375
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 431
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 549
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 422
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 472
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 473
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 366
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 231
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 444
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 320
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 484
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 407

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