C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16061
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122167 Gm16061-001 ENSMUSG00000080972 10090 - 5:135698163-135699019 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000122167
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000122167 0.667±0.25 1.310±0.37 0.141±0.00 0.946±0.23 0.488±0.21 0.294±0.06 0.497±0.07 0.457±0.44 1.457±0.40 0.536±0.34 0.331±0.20 0.104±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NP CIL_0006NP_0002 CGP 5:135632618-135735326
CIL_0006NS CIL_0006NS_0002 CGP 5:135670033-135744271

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 614
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 741
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 702
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 754
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 632
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 628
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 623
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 675
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 4e-38 159
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 656
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 538
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 364
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 719
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 571
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 547
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 571
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 708
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 721
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 387
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 204
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 385
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 385
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 580
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 204
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 603
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 385
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 497
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 496
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 527
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 606

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