C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008SK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs271 VISTA 9606 5:93591279-94192616
GeneTranscriptPositionBiotype
ENSG00000113391 (FAM172A)
family with sequence similarity 172, member A 		ENST00000395965 (FAM172A-001) 93618069-94111635 protein_coding
ENST00000502503 (FAM172A-002) 93621081-94111699 nonsense_mediated_decay
ENST00000504768 (FAM172A-008) 93910696-94074771 processed_transcript
ENST00000505869 (FAM172A-006) 93620691-94111648 protein_coding
ENST00000506398 (FAM172A-004) 93881311-94074771 retained_intron
ENST00000509163 (FAM172A-005) 93620929-94111676 protein_coding
ENST00000509739 (FAM172A-007) 93620883-94074720 protein_coding
ENST00000510445 (FAM172A-010) 93784195-93881601 retained_intron
ENST00000511139 (FAM172A-011) 93776158-93824254 retained_intron
ENSG00000175745 (NR2F1)
nuclear receptor subfamily 2, group F, member 1 		ENST00000327111 (NR2F1-001) 93583337-93594615 protein_coding
ENST00000502982 (NR2F1-003) 93587460-93588388 processed_transcript
ENST00000506162 (NR2F1-005) 93591973-93594143 processed_transcript
ENST00000512697 (NR2F1-002) 93587101-93588333 processed_transcript
ENST00000615873 (NR2F1-201) 93585024-93594072 protein_coding
ENSG00000185261 (KIAA0825)
KIAA0825 		ENST00000329378 (KIAA0825-005) 94519206-94618597 protein_coding
ENST00000427991 (KIAA0825-201) 94384367-94618604 protein_coding
ENST00000504117 (KIAA0825-004) 94412974-94477184 retained_intron
ENST00000513200 (KIAA0825-001) 94152966-94618571 protein_coding
ENSG00000248483 (POU5F2)
POU domain class 5, transcription factor 2 		ENST00000510627 (POU5F2-001) 93740308-93741637 protein_coding
ENST00000606183 (POU5F2-002) 93734806-93741123 processed_transcript
ENSG00000249353 (NPM1P27)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 27 		ENST00000502784 (NPM1P27-001) 93682838-93683667 processed_pseudogene
ENSG00000251023 (RP11-549J18.1)
 ENST00000505668 (RP11-549J18.1-001) 93860669-93863825 sense_intronic
ENSG00000272406 (RP11-185E12.2)
 ENST00000606528 (RP11-185E12.2-001) 93741640-93743500 lincRNA
ENSG00000278905 (RP11-65F13.3)
 ENST00000623223 (RP11-65F13.3-001) 93600357-93603598 TEC
CIL_0008SK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs271 VISTA 10090 13:77592212-78193533
GeneTranscriptPositionBiotype
ENSMUSG00000064138 (Fam172a)
family with sequence similarity 172, member A 		ENSMUST00000091459 (Fam172a-201) 77708690-78166238 protein_coding
ENSMUST00000099358 (Fam172a-202) 77708690-78166238 protein_coding
ENSMUST00000163257 (Fam172a-203) 77708690-78166238 protein_coding
ENSMUSG00000069171 (Nr2f1)
nuclear receptor subfamily 2, group F, member 1 		ENSMUST00000091458 (Nr2f1-001) 78188973-78199757 protein_coding
ENSMUST00000125176 (Nr2f1-002) 78189733-78196373 protein_coding
ENSMUST00000127137 (Nr2f1-004) 78189672-78197930 protein_coding
ENSMUST00000135284 (Nr2f1-005) 78189872-78190443 processed_transcript
ENSMUST00000150498 (Nr2f1-003) 78189152-78197038 protein_coding
ENSMUSG00000071252 (2210408I21Rik)
RIKEN cDNA 2210408I21 gene 		ENSMUST00000168779 (2210408I21Rik-001) 77135540-77613291 protein_coding
ENSMUSG00000093668 (Pou5f2)
POU domain class 5, transcription factor 2 		ENSMUST00000175955 (Pou5f2-001) 78024902-78026295 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SK_0001ENSG00000113391ENST00000395965ENST00000502503ENST00000504768ENST00000505869ENST00000506398ENST00000509163ENST00000509739ENST00000510445ENST00000511139ENSG00000175745ENST00000327111ENST00000502982ENST00000506162ENST00000512697ENST00000615873ENSG00000185261ENST00000329378ENST00000427991ENST00000504117ENST00000513200ENSG00000248483ENST00000510627ENST00000606183ENSG00000249353ENST00000502784ENSG00000251023ENST00000505668ENSG00000272406ENST00000606528ENSG00000278905ENST00000623223CIL_0008SK_0002ENSMUSG00000064138ENSMUST00000091459ENSMUST00000099358ENSMUST00000163257ENSMUSG00000069171ENSMUST00000091458ENSMUST00000125176ENSMUST00000127137ENSMUST00000135284ENSMUST00000150498ENSMUSG00000071252ENSMUST00000168779ENSMUSG00000093668ENSMUST00000175955
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SK_0001ENSG00000113391ENST00000395965ENST00000506398ENST00000509163ENST00000509739ENSG00000175745ENST00000327111ENST00000615873ENSG00000185261ENST00000329378ENST00000427991ENST00000504117ENST00000513200ENSG00000248483ENST00000510627ENST00000606183ENSG00000249353ENST00000502784ENSG00000251023ENST00000505668ENSG00000272406ENST00000606528ENSG00000278905ENST00000623223CIL_0008SK_0002ENSMUSG00000064138ENSMUST00000091459ENSMUST00000099358ENSMUST00000163257ENSMUSG00000069171ENSMUST00000091458ENSMUST00000125176ENSMUST00000127137ENSMUST00000150498ENSMUSG00000071252ENSMUST00000168779ENSMUSG00000093668ENSMUST00000175955
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113391 ENST00000395965 1.010±0.00 2.938±0.00 1.176±0.00 4.301±0.11 4.061±1.81 1.962±0.76 1.664±0.66 1.961±1.01 5.019±0.00 2.258±0.25 0.847±0.00 2.664±1.36 1.770±0.31 1.770±0.07
ENST00000502503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506398 N/A N/A N/A N/A N/A 3.473±0.00 N/A N/A N/A N/A N/A N/A N/A 2.890±0.00
ENST00000509163 N/A N/A 3.481±0.00 5.470±0.00 7.723±0.00 5.840±0.00 2.915±0.00 2.060±0.00 7.245±0.00 9.286±0.00 1.185±0.50 2.553±1.27 2.190±0.00 N/A
ENST00000509739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.665±0.00 N/A N/A N/A
ENST00000510445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175745 ENST00000327111 3.579±0.00 14.334±0.00 2.311±0.00 14.802±0.00 2.585±2.01 2.762±2.44 0.115±0.07 7.528±6.97 2.566±0.49 14.395±13.47 0.049±0.00 16.939±19.89 20.675±7.35 6.868±3.22
ENST00000502982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 20.511±0.00 21.360±4.68 N/A
ENSG00000185261 ENST00000329378 N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 N/A N/A N/A 0.246±0.00 N/A N/A
ENST00000427991 0.128±0.00 N/A N/A 0.783±0.00 0.495±0.00 0.123±0.00 N/A 0.179±0.00 N/A N/A 0.235±0.00 0.251±0.00 N/A 0.965±0.00
ENST00000504117 N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513200 0.163±0.00 N/A N/A 0.556±0.35 0.256±0.00 N/A N/A 0.209±0.00 N/A 0.663±0.00 0.122±0.00 N/A N/A 1.963±0.00
ENSG00000248483 ENST00000510627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.138±7.81
ENST00000606183 N/A N/A N/A N/A 1.235±0.00 0.991±0.00 0.442±0.00 0.312±0.00 1.105±0.00 1.669±0.00 0.199±0.00 N/A N/A N/A
ENSG00000249353 ENST00000502784 0.014±0.00 0.044±0.00 0.493±0.00 0.076±0.05 0.574±0.56 0.173±0.16 0.054±0.02 0.219±0.10 0.151±0.14 0.656±0.00 0.074±0.06 0.949±1.12 0.070±0.04 0.077±0.03
ENSG00000251023 ENST00000505668 0.150±0.00 0.298±0.00 0.185±0.00 0.207±0.05 0.210±0.09 0.085±0.01 0.056±0.00 0.101±0.05 0.183±0.12 0.232±0.17 0.022±0.00 0.193±0.08 0.166±0.18 0.239±0.10
ENSG00000272406 ENST00000606528 N/A 0.199±0.00 N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A 0.101±0.03 N/A 0.677±0.05
ENSG00000278905 ENST00000623223 N/A N/A 0.397±0.00 0.088±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.036±0.00 0.013±0.00 0.008±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000064138 ENSMUST00000091459 0.563±0.02 2.478±0.00 4.876±0.18 5.990±1.12 N/A 0.973±0.38 0.730±0.00 0.658±0.08 1.942±1.25 2.216±0.64 1.525±0.39 4.677±2.03 3.107±0.43 0.867±0.57
ENSMUST00000099358 4.816±1.64 19.453±3.87 N/A 2.962±0.10 7.504±6.87 5.051±1.66 1.232±0.45 2.982±1.18 1.507±0.76 6.480±3.52 N/A 12.438±3.44 N/A 1.063±0.56
ENSMUST00000163257 2.405±0.06 N/A 1.019±0.00 N/A 1.018±0.19 N/A 0.718±0.00 0.604±0.09 0.521±0.30 1.598±0.31 N/A 1.452±0.73 0.404±0.00 1.302±0.46
ENSMUSG00000069171 ENSMUST00000091458 1.242±0.23 4.609±1.14 3.560±0.21 42.445±24.12 1.311±0.12 0.432±0.11 1.081±0.06 0.597±0.14 0.342±0.28 1.933±0.35 0.140±0.05 2.684±0.78 0.271±0.21 0.106±0.05
ENSMUST00000125176 3.050±0.92 23.528±1.27 7.399±1.19 142.020±9.68 7.715±2.28 1.878±0.46 2.859±1.03 1.902±0.50 0.949±0.67 8.761±1.12 0.210±0.00 15.865±2.43 0.787±0.41 0.176±0.13
ENSMUST00000127137 3.429±1.47 N/A N/A N/A 2.771±0.82 N/A 1.572±0.00 0.469±0.01 0.143±0.00 N/A 0.278±0.01 N/A N/A N/A
ENSMUST00000135284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A 0.031±0.00
ENSMUSG00000071252 ENSMUST00000168779 0.494±0.26 0.522±0.21 0.556±0.12 1.302±0.45 0.460±0.10 0.281±0.10 0.284±0.04 0.551±0.17 0.182±0.08 0.604±0.25 0.270±0.04 0.713±0.25 0.570±0.08 3.654±1.59
ENSMUSG00000093668 ENSMUST00000175955 0.107±0.07 0.102±0.05 0.184±0.06 0.502±0.37 0.252±0.11 0.126±0.06 0.029±0.01 0.109±0.04 0.079±0.04 0.144±0.12 N/A 0.309±0.45 0.422±0.25 19.771±3.30

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