C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 28392
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077630 RP23-249L15.2-001 ENSMUSG00000101661 10090 - 1:145315156-145315548 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MQ CIL_0001MQ_0002 CGP 1:144752683-146902472

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 327
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 333
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 344
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 344
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 344
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 344
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 333
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 278
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 2.94273e-44 182

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