C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416765 RP1-22N22.1-001 ENSG00000226436 9606 - X:28659065-28659469 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleENST00000416765
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle
ENST00000416765 0.093±0.00 0.545±0.00 0.133±0.00 0.208±0.00 0.144±0.00 0.201±0.00 0.079±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162814 H3f3a-003 protein_coding Mus_musculus 0 551
ENSMUST00000161308 H3f3a-001 protein_coding Mus_musculus 0 551
ENSMUST00000119544 H3f3a-ps2-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119459 H3f3c-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119560 Gm12657-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000119546 H3f3a-ps1-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000179671 Gm10257-201 processed_pseudogene Mus_musculus 0 540
ENSMUST00000077016 Gm6421-201 processed_pseudogene Mus_musculus 0 534
ENSMUST00000081026 H3f3a-006 protein_coding Mus_musculus 0 532
ENSMUST00000121118 Gm13529-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000179566 Gm6132-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000120752 Gm3835-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000159789 H3f3a-007 protein_coding Mus_musculus 0 484
ENSMUST00000171334 Gm4938-201 processed_pseudogene Mus_musculus 0 470
ENSMUST00000169993 Gm17136-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000179046 Gm7426-201 pseudogene Mus_musculus 0 457
ENSMUST00000121719 Gm12271-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000120136 Gm15763-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000183321 Gm26980-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000117894 Gm14529-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000186232 RP23-128A11.4-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000121637 Gm14383-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000118436 Gm13349-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000159441 H3f3a-005 retained_intron Mus_musculus 0 370
ENSMUST00000116640 Gm14807-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000120730 Gm15220-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000119660 Gm8757-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000077630 RP23-249L15.2-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000118617 Gm12513-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000159685 H3f3a-004 protein_coding Mus_musculus 0 220
ENSMUST00000162118 H3f3a-002 protein_coding Mus_musculus 0 220
ENSMUST00000137042 Gm15905-001 processed_pseudogene Mus_musculus 0 215

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