C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7293
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089534 Gm7293-201 ENSMUSG00000078308 10090 + 9:51621425-51624874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089534 0.056±0.03 0.029±0.01 0.055±0.01 0.211±0.26 0.056±0.03 0.018±0.00 0.029±0.01 0.030±0.03 0.013±0.01 0.028±0.00 0.020±0.01 0.051±0.03 0.060±0.07 0.199±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004365 IEA glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0006006 IEA glucose metabolic process
GO:0006096 IEA glycolytic process
GO:0050661 IEA NADP binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1262
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 977
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1212
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1238
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1243
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 529
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 931
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 894
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1033
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 865
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 300
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 579
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 835
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 778
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1059
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 913
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 682
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 852
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 560
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 693
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 828
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 665
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 643
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 621
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-35 150
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 575
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 787
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1105
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 802
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 671
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 977
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 977
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 584
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 798
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 867
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 872
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 928
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 695
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 302
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 876
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 920
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 939
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 846
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 741
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 741
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1103

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