C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 8055
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099956 Gm8055-001 ENSMUSG00000096171 10090 + 10:40011866-40012873 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099956 0.151±0.09 0.145±0.03 0.060±0.00 0.361±0.00 0.248±0.16 0.074±0.02 0.349±0.10 0.453±0.08 0.089±0.05 0.084±0.00 0.289±0.08 0.206±0.21 0.578±0.35 0.026±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 385
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1160
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 907
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1134
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1160
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1160
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 516
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 918
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 870
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 985
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 889
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 636
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 887
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 894
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 736
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 856
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 798
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 667
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 627
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 4e-32 139
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 545
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 835
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1107
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 832
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 601
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 907
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 907
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 592
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 806
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 854
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 859
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 924
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 660
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 287
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 337
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 863
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 891
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 948
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 739
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 547
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1020

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