C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13141
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117417 Gm13141-001 ENSMUSG00000082599 10090 - 4:147527719-147528174 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainLiverLungMuscleOvaryPlacentaTestisENSMUST00000117417
Transcript ID Adipose Adrenal Bladder Brain Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117417 0.160±0.06 0.605±0.26 0.051±0.00 0.172±0.00 0.133±0.09 0.145±0.00 0.108±0.03 0.363±0.25 0.231±0.23 0.180±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 287
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 267
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 246
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 2.8026e-45 185
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 7e-39 165
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 252
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 287
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 287
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 287
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 3e-36 156
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 3e-37 159
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 219
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.00000002 64
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 230
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 287
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 281
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 287
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 200

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