C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15400
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118944 Gm15400-001 ENSMUSG00000080842 10090 + 3:123761329-123761935 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000118944
Transcript ID Brain Testis
ENSMUST00000118944 0.016±0.00 0.081±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 586
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 586
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 569
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 481
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 586
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 586
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 475
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 497
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 586
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 350
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 427
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 470
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 429
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 459
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 586

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