C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436146 RPL15-008 ENSG00000174748 9606 + 3:23917847-23920847 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000436146
Transcript ID Ovary Placenta
ENST00000436146 94.842±25.11 40.799±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EM CIL_0002EM_0002 CGP 3:23891660-23946591
CIL_0002VH CIL_0002VH_0002 CGP 3:23916545-23980618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 981
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 933
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 931
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 915
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 846
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 846
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 398
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 193

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